| School Name | Sub-County | School Level | |
|---|---|---|---|
| 1 | AIC Karare Junior Academy | Marsabit | Primary |
| 2 | AIC Marsabit Academy | Marsabit | Primary |
| 3 | Alfa Junior | Marsabit | Primary |
| 4 | EAPC Bright Future Academy | Marsabit | Primary |
| 5 | Father John Memorial | Marsabit | Primary |
| 6 | Good Shepherd Academy | Marsabit | Primary |
| 7 | Ihsan Star School Marsabit | Marsabit | Primary |
| 8 | Jamii Academy | Marsabit | Primary |
| 9 | John Paul Academy | Marsabit | Primary |
| 10 | Marsabit Jamia | Marsabit | Primary |
| 11 | Marsabit Little Angels | Marsabit | Primary |
| 12 | PCEA Boru Haro Academy | Marsabit | Primary |
| 13 | Power Junior Academy | Marsabit | Primary |
| 14 | Zad Muslim Academy | Marsabit | Primary |
| Primary Schools in Marsabit Sub County |
| List of Public Primary Schools in Marsabit |
| List of Private Primary Schools in Marsabit |
| Junior Secondary Schools (JSS) in Marsabit Sub County |
| List of Public JSS Schools in Marsabit |
| List of Private JSS Schools in Marsabit |
| High Schools in Marsabit Sub County |
| List of Public High Schools in Marsabit |
| List of Private High Schools in Marsabit |