| School Name | Sub-County | Sponsorship | |
|---|---|---|---|
| 1 | Cornerstone Education Complex Junior Secondary School | Cheptais Sub County | Private |
| 2 | Kimaswa Hill Junior Secondary School | Cheptais Sub County | Private |
| Primary Schools in Cheptais County |
| List of Public Primary Schools in Cheptais |
| List of Private Primary Schools in Cheptais |
| Junior Secondary Schools (JSS) in Cheptais County |
| List of Public JSS Schools in Cheptais |
| List of Private JSS Schools in Cheptais |
| High Schools in Cheptais County |
| List of Public High Schools in Cheptais |
| List of Private High Schools in Cheptais |